Publications

2020

Escherichia coli small proteome.
Hemm MR, Weaver J, and Storz G.
EcoSal Plus. in press. Review.

2018

Identifying new small proteins in Escherichia coli.
VanOrsdel CE, Kelly JP, Burke BN, Lein CD, Oufiero CE, Sanchez JF, Wimmers LE, Hearn DJ, Abuikhdair FJ, Barnhart KR, Duley ML, Ernst SEG, Kenerson BA, Serafin AJ, and Hemm MR.
Proteomics. 2018 May;18(10):e1700064. PMID:29645342.

Investigation of amino acid specificity in the CydX small protein shows sequence plasticity at the functional level.
Hobson JJ, Gallegos AS, Atha BW 3rd, Kelly JP, Lein CD, VanOrsdel CE, Weldon JE, and Hemm MR.
PLoS One. 2018 June;13(6):e0198699. PMID:29912917.

2017

Identification of virulence and virulence regulatory factors in Escherichia coli using Dictyostelium discoideum as a model phagocyte.
Snyder MS, Weichseldorfer M, Lane J, Kazmierski R, Bains H, White T, Parker D, Alkharouf N, and Hemm MR.
J Immunol. 2017 May;198:131, 19-131.19. Published meeting abstract.

2016

Development of Dictyostelium discoideum as a model to identify evolutionarily-conserved virulence factors in Escherichia coli.
Snyder MS, Weichseldorfer M, Parker D, Qureshi M, Phan P, White T, Leicht B, Alkharouf N, Rasko D, and Hemm MR.
J Immunol. 2016 May;196:66.26-66.26. Published meeting abstract.

2014

Conservation analysis of the CydX protein yields insights into small protein identification and evolution.
Allen RJ and Brenner EP, VanOrsdel CE, Hobson JJ, Hearn DJ and Hemm MR.
BMC Genomics. 2014 Dec;15(1):946. PMID:25475368.

2013

The Escherichia coli CydX protein is a member of the CydAB cytochrome bd oxidase complex and is required for cytochrome bd oxidase activity.
VanOrsdel CE, Bhatt S, Allen RJ, Brenner EP, Hobson JJ, Jamil A, Haynes BM, Genson AM, and Hemm MR.
J Bacteriol. 2013 Aug;195(16):3640-50. PMID:23749980.

2011

RNase III participates in GadY-dependent cleavage of the gadX-gadW mRNA.
Opdyke JA, Fozo EM, Hemm MR, and Storz G.
J Mol Biol. 2011 Feb;406(1):29-43. PMID:21147125.

2010

Small stress response proteins in Escherichia coli: proteins missed by classical proteomic studies.
Hemm MR, Paul BJ, Miranda-Ríos J, Zhang A, Soltanzad N, and Storz G.
J Bacteriol. 2010 Jan;192(1):46-58. PMID:19734316.

2008

Small membrane proteins found by comparative genomics and ribosome binding site models.
Hemm MR, Paul BJ, Schneider TD, Storz G, and Rudd KE.

Mol Microbiol. 2008 Dec;70(6):1487-501. PMID:19121005.

Small toxic proteins and the antisense RNAs that repress them.
Fozo EM, Hemm MR, and Storz G.

Microbiol Mol Biol Rev. 2008 Dec;72(4):579-89. PMID:19052321. Review.

2004

Light induces phenylpropanoid metabolism in Arabidopsis roots.
Hemm MR, Rider SD, Ogas J, Murry DJ, and Chapple C.

Plant J. 2004 Jun;38(5):765-78. PMID:15144378.

Metabolic profiling of the Arabidopsis pkl mutant reveals selective derepression of embryonic traits.
Rider SD Jr, Hemm MR, Hostetler HA, Li HC, Chapple C, and Ogas J.

Planta. 2004 Jul;219(3):489-99. PMID:15085429.

2003

The Arabidopsis ref2 mutant is defective in the gene encoding CYP83A1 and shows both phenylpropanoid and glucosinolate phenotypes.
Hemm MR, Ruegger MO, and Chapple C.
Plant Cell. 2003 Jan;15(1):179-94. PMID:12509530.

2002

Changes in secondary metabolism and deposition of an unusual lignin in the ref8 mutant of Arabidopsis.
Franke R, Hemm MR, Denault JW, Ruegger MO, Humphreys JM, and Chapple C.

Plant J. 2002 Apr;30(1):47-59. PMID:11967092.

The Arabidopsis REF8 gene encodes the 3-hydroxylase of phenylpropanoid metabolism.
Franke R, Humphreys JM, Hemm MR, Denault JW, Ruegger MO, Cusumano JC, and Chapple C.

Plant J. 2002 Apr;30(1):33-45. PMID:11967091.

2001

Elucidation of new structures in lignins of CAD- and COMT-deficient plants by NMR.
Ralph J, Lapierre C, Marita JM, Kim H, Lu F, Hatfield RD, Ralph S, Chapple C, Franke R, Hemm MR, Van Doorsselaere J, Sederoff RR, O’Malley DM, Scott JT, MacKay JJ, Yahiaoui N, Boudet A, Pean M, Pilate G, Jouanin L, and Boerjan W.

Phytochemistry. 2001 Jul;57(6):993-1003. PMID:11423146.

AtMYB4: a transcription factor general in the battle against UV.
Hemm MR, Herrmann KM, and Chapple C.

Trends Plant Sci. 2001 Apr;6(4):135-6. PMID:11286899. Review.

1999

New routes for lignin biosynthesis defined by biochemical characterization of recombinant ferulate 5-hydroxylase, a multifunctional cytochrome P450-dependent monooxygenase.
Humphreys JM, Hemm MR, and Chapple C.

Proc Natl Acad Sci U S A. 1999 Aug 31;96(18):10045-50. PMID:10468559.